3.1.2.2 Paper histology subtypes

acronym histology
DDLPS DeDifferentiated LiPoSarcoma
MFS MyxoFibroSarcoma
SS Synovial Sarcoma
STLMS LeioMyoSarcoma - Soft Tissue
ULMS LeioMyoSarcoma - gynecologic (Uterine source, but can also be ovary or retroperitoneum
UPS Undifferentiated Pleomorphic Sarcoma
MPNST Malignant Peripheral Nerve Sheath Tumor
Number of samples by sarcoma subtypes.

Figure 3.24: Number of samples by sarcoma subtypes.

Number of samples by sarcoma subtypes and sex.

Figure 3.25: Number of samples by sarcoma subtypes and sex.

Distribution of VNN1 signal in all sarcoma subtypes from TCGA-SARC dataset as histogram

Figure 3.26: Distribution of VNN1 signal in all sarcoma subtypes from TCGA-SARC dataset as histogram

Distribution of VNN1 signal in all sarcoma subtypes from TCGA-SARC dataset as box-beeswarm-plots

Figure 3.27: Distribution of VNN1 signal in all sarcoma subtypes from TCGA-SARC dataset as box-beeswarm-plots

Distribution of VNN1 signal in all sarcoma subtypes from TCGA-SARC dataset as box-beeswarm-plots, splitted by gender

Figure 3.28: Distribution of VNN1 signal in all sarcoma subtypes from TCGA-SARC dataset as box-beeswarm-plots, splitted by gender

Distribution of VNN1 signal in all sarcoma subtypes from TCGA-SARC dataset as box-beeswarm-plots, splitted by gender and paper_short_histo

Figure 3.29: Distribution of VNN1 signal in all sarcoma subtypes from TCGA-SARC dataset as box-beeswarm-plots, splitted by gender and paper_short_histo

Distribution of VNN1 signal in all sarcoma subtypes from TCGA-SARC dataset. VNN1+ and VNN1- classes are called using the median VNN1 VST signal as threshold.

Figure 3.30: Distribution of VNN1 signal in all sarcoma subtypes from TCGA-SARC dataset. VNN1+ and VNN1- classes are called using the median VNN1 VST signal as threshold.