4.3.2.7 Rat+Mouse Fluoxetine VS Control for Stressed and no stressed in Dentate Gyrus

This section corresponds to the 4 meta-analysis requested by El Chérif.

Table 4.14: Mapping between ids and designs used in the integration plots below
design_ids designs
1-GSE118669 GSE118669-FluoxetineVsVehicle
2-GSE42940 GSE42940-FluoxetineVsControl
3-GSE43261 GSE43261-FluoxetineResponderVsControl
4-GSE54307 GSE54307-FluoxetineVsVehicle
5-GSE56028 GSE56028-FluoxetineVsUntreatedForStressed
6-GSE6476 GSE6476-FluoxetineVsControl
7-GSE84185 GSE84185-FluoxetineVsControlForNoStressedInDentateGyrus
8-GSE84185 GSE84185-FluoxetineVsControlForStressedResponderInDentateGyrus
9-SRP056481 SRP056481-FluoxetineVsMethylcellulose
10-SRP057486 SRP057486-FluoxetineVsVehicleForBrainCA1NonShocked
11-SRP057486 SRP057486-FluoxetineVsVehicleForBrainCA1StressedSubset
12-SRP084288 SRP084288-FluoxetineVsModelOfDepressionWithTissueAsCovariate
13-SRP131063 SRP131063-FluoxetineVsSalineForStressed
14-Surget2009 Surget2009-FluoxetineVsSalineForStressedInDentateGyrus
Alphabetically-sorted genes significant in at least one comparison (padj < 0.05). + and – signs highlight respectively upregulated and downregulated genes (|logFoldChange| > 0.1 and raw pvalue < 0.05).

Figure 4.108: Alphabetically-sorted genes significant in at least one comparison (padj < 0.05). + and – signs highlight respectively upregulated and downregulated genes (|logFoldChange| > 0.1 and raw pvalue < 0.05).

The xlsx table with all genes is available here

Consensus-sorted genes significant in at least one comparison (p-value < 0.05 and p-value rank < 301). + and – signs highlight respectively upregulated and downregulated genes (|logFoldChange| > 0.1 and raw pvalue < 0.05). Underlying table is available [here](xlsx/resultsIntegrationOriginalSpecieRatMouseFluoxetineVsControlForStressedAndNoStressedConsensus.xlsx)

Figure 4.109: Consensus-sorted genes significant in at least one comparison (p-value < 0.05 and p-value rank < 301). + and – signs highlight respectively upregulated and downregulated genes (|logFoldChange| > 0.1 and raw pvalue < 0.05). Underlying table is available here