4.3.1.2 Rat Stress Alone VS Stress Fluoxetine in Dentate Gyrus

This section corresponds to the second meta-analysis requested by El Chérif.

Table 4.2: Mapping between ids and designs used in the integration plots below
id design
1-GSE56028 GSE56028-FluoxetineVsUntreatedForStressed
2-SRP084288 SRP084288-FluoxetineVsModelOfDepressionWithTissueAsCovariate
3-SRP131063 SRP131063-FluoxetineVsSalineForStressed
Alphabetically-sorted genes significant in at least one comparison (padj < 0.05). + and – signs highlight respectively upregulated and downregulated genes (|logFoldChange| > 0.1 and raw pvalue < 0.05).

Figure 4.78: Alphabetically-sorted genes significant in at least one comparison (padj < 0.05). + and – signs highlight respectively upregulated and downregulated genes (|logFoldChange| > 0.1 and raw pvalue < 0.05).

Consensus-sorted genes significant in at least one comparison (padj < 0.05). + and – signs highlight respectively upregulated and downregulated genes (|logFoldChange| > 0.1 and raw pvalue < 0.05).

Figure 4.79: Consensus-sorted genes significant in at least one comparison (padj < 0.05). + and – signs highlight respectively upregulated and downregulated genes (|logFoldChange| > 0.1 and raw pvalue < 0.05).

Consensus-sorted genes significant in at least one comparison (padj < 0.0001). + and – signs highlight respectively upregulated and downregulated genes (|logFoldChange| > 0.1 and raw pvalue < 0.05). Underlying table is available [here](xlsx/resultsIntegrationRatStressAloneVsStressFluoxetineConsensusPadj0p0001.xlsx)

Figure 4.80: Consensus-sorted genes significant in at least one comparison (padj < 0.0001). + and – signs highlight respectively upregulated and downregulated genes (|logFoldChange| > 0.1 and raw pvalue < 0.05). Underlying table is available here