4.3.2.3 Rat+Mouse Fluoxetine VS Control for Stressed in Dentate Gyrus

This section corresponds to the first+second meta-analysis requested by El Chérif.

Table 4.10: Mapping between ids and designs used in the integration plots below
design_ids	designs
1-GSE43261	GSE43261-FluoxetineResponderVsControl
2-GSE56028	GSE56028-FluoxetineVsUntreatedForStressed
3-GSE84185	GSE84185-FluoxetineVsControlForStressedResponderInDentateGyrus
4-SRP057486	SRP057486-FluoxetineVsVehicleForBrainCA1StressedSubset
5-SRP084288	SRP084288-FluoxetineVsModelOfDepressionWithTissueAsCovariate
6-SRP131063	SRP131063-FluoxetineVsSalineForStressed
7-Surget2009	Surget2009-FluoxetineVsSalineForStressedInDentateGyrus

Alphabetically-sorted genes significant in at least one comparison (padj < 0.05). + and – signs highlight respectively upregulated and downregulated genes (|logFoldChange| > 0.1 and raw pvalue < 0.05).

Figure 4.100: Alphabetically-sorted genes significant in at least one comparison (padj < 0.05). + and – signs highlight respectively upregulated and downregulated genes (|logFoldChange| > 0.1 and raw pvalue < 0.05).

The xlsx table with all genes is available here

Consensus-sorted genes significant in at least one comparison (p-value < 0.05 and p-value rank < 301). + and – signs highlight respectively upregulated and downregulated genes (|logFoldChange| > 0.1 and raw pvalue < 0.05). Underlying table is available [here](xlsx/resultsIntegrationOriginalSpecieRatMouseFluoxetineVsControlForStressedConsensus.xlsx)

Figure 4.101: Consensus-sorted genes significant in at least one comparison (p-value < 0.05 and p-value rank < 301). + and – signs highlight respectively upregulated and downregulated genes (|logFoldChange| > 0.1 and raw pvalue < 0.05). Underlying table is available here